Environmental and Biological
Assessment of Portions of the
Prepared by Monterey Peninsula
Water Management District
Under Contract with
October 2004
Qualitative and quantitative methods were used to assess
several indicators of the health and resiliency of the
Detailed biologic information is sparse prior to the early
1980’s, but data gathered since on steelhead numbers and habitat, channel form,
water quality, and riparian vegetation are relatively robust. However, information on CRLF and the BMI
community is limited, which makes analysis and observations of trends subject
to a degree of uncertainty.
Relatively large data sets exist for the following:
Less extensive data sets that form a baseline include:
Information about the main stem is regularly updated by
MPWMD and there are other public and private agencies also gathering data in
the watershed. Data presented in this
assessment is from records in the possession of MPWMD and it is possible that
more information on the topics presented here exists. Because many organizations and agencies
continue to gather environmental data on the Carmel River Watershed, the
information presented here should be considered a first step in understanding
and assessing the watershed.
It is apparent that many reaches
of the river can provide high quality,
productive habitat for steelhead; however, the current steelhead population is
below historic numbers for the
Another species of concern,
Surveys of riparian-wetland areas along the nine-mile reach
upstream of Los Padres Reservoir show these areas are the least impacted by
human influences and remain naturally sustainable. Between Los Padres Dam and the Narrows, a
distance of approximately 15 miles, riparian areas appear to be in reasonably
good condition, although channel degradation (incision into sediment deposits)
immediately downstream of Los Padres Dam and San Clemente Dam has left the root
structures of many streamside trees exposed to scour and erosion. In addition, the paucity of spawning-sized
gravels and cobbles in these reaches renders portions of the habitat unsuitable
for steelhead spawning in an area that should provide significant opportunity
for spawning. Between the Narrows and
the
The cumulative effect of human influences has resulted in a
fragmented environment in the lower 27 miles of the river that requires
intensive management efforts. Between
Los Padres Dam and the
Riparian (Streamside) Areas
The proper functioning condition
(PFC) method for assessing the condition of riparian-wetland areas, which was
developed by the U.S. Bureau of Land Management and U.S. Forest Service for use
by land managers, was used to assess 37 sites along the main stem from the
Carmel River Lagoon to the headwaters.
These assessments, which were carried out during Fall 2003 and Spring
2004, confirm that many reaches are currently functioning properly between the
Since the mid-1980’s, points of water diversion during
summer and fall have gradually been shifted downstream into the lower river and
groundwater extraction from reaches downstream of the Narrows has been
increased. This has increased summer and
fall surface flow in the 8.6-mile reach between the Narrows and San Clemente Dam,
resulting in an increase in aquatic habitat quality, quantity, and diversity
upstream of the
Between 1986 and 2001, riparian wooded areas within the
streamside corridor downstream of San Clemente Dam have increased from an
estimated 299 acres (McNeish,1986) to an estimated 438 acres (Christensen,
2003). This increase is due to natural
recovery after an episode of bank erosion between 1978 and 1986 combined with
increased surface flows and restoration work by a variety of groups including
private property owners and public agencies.
An inventory of large wood (LW), which is defined as branches and pieces of trunks greater than six inches in diameter and five feet in length, was conducted in the channel bottom in 2002 and 2003 between the Carmel River Lagoon and Stonepine Resort at RM 16 (Smith and Huntington, 2004). The study, which documented 471 occurrences of LW, showed a considerable range in the frequency of single pieces and accumulations found in each reach, but the trend shows that frequency decreases in the downstream direction. LW in the lower river tended to be larger and more stable than in upstream reaches, a condition that is to be expected as winter streamflows normally increase in the downstream direction and wash smaller pieces out to the ocean. Almost 30% of wood was fostering pool habitat in the bed. About 70% of LW had no significant impact to lateral channel stability. Less than 4% was found to encourage bank erosion. About 7% of LW had been deliberately placed to enhance aquatic habitat.
In general, higher frequencies of
LW were associated with higher densities of steelhead, although there were
notable exceptions. In reaches where LW
was relative abundant, but steelhead numbers were low, it is likely that the
availability of LW was not a limiting factor and that other factors such as
substrate condition, food availability, and water quantity and quality were
more significant.
The riparian corridor between Highway 1 and
Steelhead Returns, Spawning,
and Juvenile Rearing
The numbers of
returning steelhead adults hit a low in the early 1990s, and the run was
declared to be nearly extinct by the California Department of Fish and Game (McEwan
and Jackson, 1996). The number of
returning adults has rebounded from the drought years of the early 1990’s when
only a handful of fish were counted and appears to have stabilized in the range
of 400-800 fish. Upstream of Los Padres
Dam, adult returns have averaged 190 fish since 1997. Between Los Padres Dam and San Clemente Dam,
a comparison of returns before and after 1980 indicates that the adult return
to this portion of the basin has not recovered to levels that were common in
the earlier period. Since 1997, the
number of adults counted at San Clemente Dam has averaged 604 and ranged from a
low of 388 fish in 2004 to a high of 861 fish in 1998, with a clear upward
trend during the seven-year period immediately following the 1987-1991
drought. But, the overall population has
not reached levels that were common prior to the 1976-77 drought, when the
index of adult returns from the 1962 to 1975 period indicates the run was about
30 percent higher than the average in recent years.
Most of the tributaries and main stem areas containing spawning
habitat have been surveyed, with Chupines and Hitchcock Creeks being notable
exceptions. Within surveyed areas, approximately 66.9 miles of stream are
accessible to adults in normal and above water years. When no temporary barriers limit upstream
migration, adult steelhead spawn in a total of 60.5 miles of stream, including
24.5 miles of the main stem, 30 miles of primary tributaries, and six miles of
secondary tributaries. In the remaining
6.4 miles of accessible stream, spawning is limited by water availability in
late spring. In dry and some below
normal water years, adults probably do not ascend to the uppermost permanent
barriers on the primary and secondary tributaries, but utilize the entire 24.5
miles of the main stem up to Los Padres Dam.
Those unable to migrate past barriers are forced to spawn below smaller
falls and chutes or in the main stem.
It is estimated that the spawning habitat in the main stem can
support approximately 2,400 nests, equivalent to a run of 4,800 adults or about
193 spawners per mile of stream.
However, 50% of this habitat is located upstream of Los Padres Dam,
where disproportionately low returns of adults to Los Padres Dam indicate that
spawning habitat upstream of Los Padres Dam has not been fully utilized for
many years and that the amount of spawning habitat upstream of the reservoir is
most likely not the primary limiting factor.
This condition was first noted by CDFG in the 1950’s
shortly after completion of the Los Padres Dam.
Spawning areas influenced by the armoring effect of the main stem dams
are estimated to have 25% of the habitat per mile found in similar areas
upstream of Los Padres Reservoir. Armoring refers to the coarsening of the
channel bottom over time as gravel and cobble is stripped out by high flows
with no new gravel and cobble able to pass the dams to replace lost materials. This effect is dramatic in the reaches from
Los Padres Dam to the confluence with Cachagua Creek and from San Clemente Dam
to the confluence with Tularcitos Creek.
In these reaches, much of the channel bottom is covered with boulders
and sand, with little spawning sized material visible. Armoring lessens in the downstream direction
due to inputs of gravel and cobbles from tributaries and main stem bed and bank
erosion.
In most years, 49 to
53 miles of rearing habitat are available in the watershed with approximately
one-half in the main stem and the remainder in primary and secondary
tributaries. The length of viable
habitat is somewhat dependent on flow levels downstream of San Clemente Dam and
on the amount of diversion of subsurface flow (i.e., the volume of water pumped
from wells). It is estimated that this
rearing habitat can support up to 245,000 young-of-the-year steelhead. Similar to spawning habitat, an estimated 42%
of juvenile rearing habitat is located above Los Padres Reservoir, where fish
densities appear to be much lower than in other areas of the river.
For areas downstream
of Los Padres Dam, juvenile density per mile of stream remains 72% of the
density found in previous
The listing of CRLF in
1996 as a threatened species by the U.S. Fish and Wildlife Service (USFWS) has
triggered additional scrutiny of water extraction and land management practices
in
Limiting factors for
this species includes the introduction of non-native species such as bullfrogs,
crayfish, bass, and mosquito fish, habitat fragmentation and degradation due to
urbanization, and water extraction practices.
Upstream of Los Padres Reservoir, the only known limiting factor for
CRLF is the presence of bullfrogs.
Limiting factors increase downstream of Los Padres Dam, with the highest
number of limiting factors found between
A recovery plan, which
was published by USFWS in 2002, makes detailed recommendations for recovery and
sets out five requirements for delisting of the species, including maintenance
of a stable population. A minimum of 15
years of data would be needed, which would require a significant monitoring
program to document population status.
Water Quality
Conditions in the Main Stem and Lagoon
Water temperature has
been measured at a total of 11 locations including the Lagoon (two sites), the
Narrows,
Chemical and physical
data on surface water quality, including temperature, dissolved oxygen (DO),
carbon dioxide (CO2), pH, and specific conductance have been
collected since 1991 immediately downstream of Los Padres and San Clemente Dams
and at the Carmel River Lagoon. Beginning
in 1996, continuous recording temperature sensors were placed at these
locations and at two additional locations –
In general, DO, CO2,
and pH levels in the main stem have met Central Coast Basin Plan objectives set
by the California Regional Water Quality Control Board. However, average daily water temperature
during the late summer and fall commonly exceeds the range for optimum
steelhead growth (50-60°F). Monitoring
stations in the flowing portions of the river (i.e., excluding the Lagoon and
main stem reservoirs) shown that water temperature during these months remains
in a stressful range and can reach levels that threaten aquatic life (above
70°F). Linear trend analysis of data
from the eight-year period between 1996 and 2004 at the Garland Park station,
where water temperature annually exceeds 70°F, shows a slight downward trend in
maximum daily water temperature. This may be due to the recovery of the
riparian zone upstream and the shade it provides along the river. Water temperature in winter and spring is
frequently in the range that is considered optimum for steelhead growth.
Turbidity in the main
stem is normally low, except during winter when storm runoff events can elevate
turbidity for several days during and after a storm event. Very wet years, such as in 1998, can cause
extensive landslides and bank erosion, which can increase turbidity in the main
stem for up to several months. More
recently, in the reach immediately downstream of the San Clemente Dam, it
appears that fine sediment released from the reservoir during drawdown
operations has increased turbidity at the Sleepy Hollow weir.
Water quality in the
Lagoon typically declines during late summer and fall as freshwater inflows
cease and ocean waves start to overtop the sandbar at the mouth of the
river. Water temperature often exceeds
70°F, which is above Central Coast Basin Plan guidelines. DO levels also periodically drop below
guidelines (not less than 7.0 mg/L), probably due to a combination of
increasing water temperature and decomposition of marine organic material
washed into the lagoon by high ocean waves.
Benthic
Macroinvertebrate Community
The community of insects living in the river bottom, which are
called benthic macroinvertebrates (BMI), is an important food source for
steelhead and an indicator of water quality.
But the study of this community as an indicator of a stream’s health is
relatively new. For the
Recommendations
There are several
short-term actions (i.e., over the next five to ten years) that the Carmel
River Watershed Council may wish to consider that would improve
·
expand the existing program of periodic
injections of spawning-sized gravels and cobbles downstream of Los Padres and
San Clemente Dams to a level that restores the channel bottom to a condition
similar to areas upstream of Los Padres Reservoir;
·
implement riparian corridor restoration
projects that will establish permanent CRLF habitat;
·
actively promote stewardship concepts and
projects among river front property owners through peer-to-peer groups and
multi-media outreach (newspaper, television, internet, mailings, etc.).
Additional activities
that could improve management of the riparian corridor include:
·
decrease the sampling frequency for BMI
to once per year and add BMI sampling locations upstream of Los Padres
Reservoir, at the Pine Creek confluence with the main stem, in a sandy reach in
the lower river, and at the Carmel River Lagoon;
·
develop a data collection program to
document the CRLF population within the watershed;
·
investigate whether control or
eradication of non-native aquatic species (especially bullfrogs) is feasible;
·
develop a database of documents
pertaining to the riparian corridor such as reports, environmental analyses,
biological opinions, and regulations.
Below are several
recommendations that would help ensure a long-term increase of habitat quantity
and quality in the main stem of the
·
investigate means to reduce summer
heating of the river as it passes through reservoir areas;
·
increase the use of steelhead spawning
and rearing habitat upstream of Los Padres Reservoir;
·
implement a dredging program or other
method to pass bedload (sand, gravel, and cobble) from the upper watershed
around Los Padres and San Clemente Reservoirs
·
expand riparian forest areas in the alluvial
reach between
·
remove San Clemente Dam and the
accumulated fine sediments from within the reservoir area and reestablish
spawning areas within the channel bottom;
·
consider the feasibility of approximating
an unimpaired flow condition downstream of Los Padres Dam during the summer low
flow season (i.e., a surface flow in the river equivalent to the flow that
would occur in the absence of surface and groundwater diversions).
Future Water
Supply Projects and Los Padres Reservoir Sedimentation
In 1995, California
American Water (Cal-Am) was ordered by the California State Water Resources
Control Board (State Board) to reduce its water extraction from
New water supplies
would reduce diversions from
It is estimated that
unless sediment is removed, within 40 to 50 years Los Padres Reservoir will be
100% silted in and have virtually no surface storage capacity. However, the sedimentation rate at Los Padres
Reservoir is not uniform over time and significant storage loss can occur in a
single winter season. The planning and
implementation of a program or project(s) to cope with the inevitable
sedimentation of Los Padres Reservoir and reduced dry season flows could take
several years.
Future
Assessment Analysis
Final information on
the following topics was not available at the time this assessment was
completed (October 2004):
·
5.5.1.4 Trend analysis for juvenile and
adult steelhead (draft text included in this document)
·
5.5.1.6 Constraints and limiting factors
for steelhead
·
5.7.5 Link between steelhead and BMI
It is anticipated that
these sections will be available in the winter of 2004-2005.
____________________________
References
Christensen, T.T. 2003. Using GIS to Quantify Riparian Area
Overlying the
McEwan, D. and T.A. Jackson. 1996. Steelhead
Restoration and Management Plan for
McNeish, C.M. 1986. Effects
of Production Well Pumping on Plant Stress in the Riparian Corridor of the
Reis, Dawn, 2003 Annual Report for Permit #TE-057714-0
Under section 10(a)(1)(A) of the ESA for submission to the United States
Department of Interior Fish and Wildlife Service by Dawn Reis.
Reis, Dawn 2003. California Red-legged Frog Tadpole
Surveys and Translocations During the California-American Water Company 2003
Water Withdrawal in the Carmel River, Monterey County, CA: The United States
Fish and Wildlife Service Biological Opinion (1-8-99-FW-7), Prepared by
Dawn Reis Ecological Studies.
Smith, D.P., and Huntington, P.,
2004. Carmel River large woody debris
inventory from Stonepine to Carmel Lagoon, Fall, 2003: Watershed Institute,
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